STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCP99437.1LacI family transcriptional regulator. (329 aa)    
Predicted Functional Partners:
SCP95950.1
PTS system, D-glucosamine-specific IIC component.
    
 0.780
SCP97277.1
PTS system, beta-glucosides-specific IIC component.
    
 0.780
SCP98741.1
LacI family transcriptional regulator.
  
 
  0.716
SCP99436.1
Hypothetical protein.
       0.574
SCP98569.1
PTS system, sucrose-specific IIC component.
 
 
 0.543
SCP97279.1
PTS system, N-acetylglucosamine-specific IIC component.
    
 0.536
SCP96318.1
Ribose 5-phosphate isomerase B.
    
  0.457
SCP96320.1
Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
    
  0.457
SCP99438.1
3-dehydro-L-gulonate 2-dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
       0.438
SCP96393.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 
 0.424
Your Current Organism:
Anaerobium acetethylicum
NCBI taxonomy Id: 1619234
Other names: A. acetethylicum, Anaerobium acetethylicum Patil et al. 2015, Clostridiales bacterium GluBS11, DSM 29698, KCTC 15450, LMG 28619, LMG:28619, strain GluBS11
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