STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCP99424.14-hydroxythreonine-4-phosphate dehydrogenase; Belongs to the PdxA family. (332 aa)    
Predicted Functional Partners:
SCP99423.1
Putative sugar-binding N-terminal domain-containing protein.
     0.943
SCP94788.1
Uncharacterized conserved protein YgbK, DUF1537 family.
     0.835
SCP99425.1
gluconate:H+ symporter, GntP family.
 
     0.785
SCP97837.1
Uncharacterized conserved protein YgbK, DUF1537 family.
     0.784
serC
Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
     
 0.769
SCP95119.1
Threonine synthase.
    
  0.727
SCP97839.1
2-keto-3-deoxygluconate permease.
 
     0.643
SCP99426.1
DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family.
       0.623
SCP98796.1
Regulatory protein, Fis family.
 
  
 0.520
rsmA
16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
 
  
 0.513
Your Current Organism:
Anaerobium acetethylicum
NCBI taxonomy Id: 1619234
Other names: A. acetethylicum, Anaerobium acetethylicum Patil et al. 2015, Clostridiales bacterium GluBS11, DSM 29698, KCTC 15450, LMG 28619, LMG:28619, strain GluBS11
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.