STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCP99559.1Type I restriction enzyme, S subunit. (373 aa)    
Predicted Functional Partners:
SCP99554.1
Type I restriction enzyme M protein.
 
 0.999
SCP99561.1
Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
 0.988
SCP96792.1
Type I restriction enzyme, R subunit.
 
  
 0.846
SCP99553.1
DNA-binding transcriptional regulator, XRE family.
       0.788
SCP99569.1
Type I restriction enzyme, R subunit.
  
  
 0.787
SCP99558.1
Hypothetical protein.
       0.786
SCP99397.1
Predicted ATP-dependent endonuclease of the OLD family, contains P-loop ATPase and TOPRIM domains.
  
  
 0.773
SCP98206.1
ATP-dependent DNA helicase RecG.
 
    0.559
SCP98202.1
ATP-dependent DNA helicase RecG.
 
    0.556
SCP99949.1
AAA domain (dynein-related subfamily).
  
  
 0.508
Your Current Organism:
Anaerobium acetethylicum
NCBI taxonomy Id: 1619234
Other names: A. acetethylicum, Anaerobium acetethylicum Patil et al. 2015, Clostridiales bacterium GluBS11, DSM 29698, KCTC 15450, LMG 28619, LMG:28619, strain GluBS11
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