STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCQ00033.1YD repeat-containing protein. (173 aa)    
Predicted Functional Partners:
SCQ00029.1
YD repeat-containing protein.
 
    0.872
SCQ00032.1
Tetratricopeptide repeat-containing protein.
       0.437
SCQ00031.1
Hypothetical protein.
       0.415
SCP98936.1
Predicted TIM-barrel enzyme.
   
    0.410
SCP98935.1
Uncharacterized protein, UPF0261 family.
   
    0.402
Your Current Organism:
Anaerobium acetethylicum
NCBI taxonomy Id: 1619234
Other names: A. acetethylicum, Anaerobium acetethylicum Patil et al. 2015, Clostridiales bacterium GluBS11, DSM 29698, KCTC 15450, LMG 28619, LMG:28619, strain GluBS11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.