STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARJ04173.1IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)    
Predicted Functional Partners:
ARJ04203.1
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.775
ARJ07034.1
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.775
ARJ04175.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.645
ARJ04179.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.547
ARJ04176.1
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.542
ARJ04177.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.540
ARJ04174.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.534
ARJ04178.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.534
ARJ05365.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.452
ARJ05364.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.411
Your Current Organism:
Cnuibacter physcomitrellae
NCBI taxonomy Id: 1619308
Other names: C. physcomitrellae, CGMCC 1.15041, Cnuibacter physcomitrellae Zhou et al. 2016, DSM 29843, Microbacteriaceae bacterium XA, strain XA
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