Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARJ05333.1 | ARJ05335.1 | B5808_08965 | B5808_08975 | Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.701 |
ARJ05333.1 | ARJ05336.1 | B5808_08965 | B5808_08980 | Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.473 |
ARJ05333.1 | glgC | B5808_08965 | B5808_08970 | Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.979 |
ARJ05335.1 | ARJ05333.1 | B5808_08975 | B5808_08965 | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.701 |
ARJ05335.1 | ARJ05336.1 | B5808_08975 | B5808_08980 | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.429 |
ARJ05335.1 | glgC | B5808_08975 | B5808_08970 | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.807 |
ARJ05336.1 | ARJ05333.1 | B5808_08980 | B5808_08965 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.473 |
ARJ05336.1 | ARJ05335.1 | B5808_08980 | B5808_08975 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.429 |
ARJ05336.1 | ARJ05382.1 | B5808_08980 | B5808_09240 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.495 |
ARJ05336.1 | glgC | B5808_08980 | B5808_08970 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.432 |
ARJ05382.1 | ARJ05336.1 | B5808_09240 | B5808_08980 | Glutamate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.495 |
glgC | ARJ05333.1 | B5808_08970 | B5808_08965 | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.979 |
glgC | ARJ05335.1 | B5808_08970 | B5808_08975 | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.807 |
glgC | ARJ05336.1 | B5808_08970 | B5808_08980 | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.432 |