STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARJ07428.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)    
Predicted Functional Partners:
ARJ06438.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.973
ARJ06437.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.933
ARJ04718.1
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
 
 0.887
ARJ07216.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.886
ARJ04006.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.877
ARJ06744.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.874
ARJ06435.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.869
ARJ06434.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.863
ARJ06436.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.862
ARJ03860.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.861
Your Current Organism:
Cnuibacter physcomitrellae
NCBI taxonomy Id: 1619308
Other names: C. physcomitrellae, CGMCC 1.15041, Cnuibacter physcomitrellae Zhou et al. 2016, DSM 29843, Microbacteriaceae bacterium XA, strain XA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.