STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARJ06829.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (222 aa)    
Predicted Functional Partners:
ARJ06826.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.925
ARJ06825.1
Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.865
ARJ06830.1
3-isopropylmalate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.808
ARJ06827.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.784
ARJ06828.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.751
ARJ04113.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.679
ARJ06831.1
Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH2/MDH2 oxidoreductase family.
       0.620
ARJ06832.1
Citrate:proton symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.613
ARJ06833.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.455
ARJ04110.1
Ribulose 1,5-bisphosphate carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RuBisCO large chain family.
 
     0.415
Your Current Organism:
Cnuibacter physcomitrellae
NCBI taxonomy Id: 1619308
Other names: C. physcomitrellae, CGMCC 1.15041, Cnuibacter physcomitrellae Zhou et al. 2016, DSM 29843, Microbacteriaceae bacterium XA, strain XA
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