STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
puuBGamma-glutamylputrescine oxidoreductase. (368 aa)    
Predicted Functional Partners:
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
  
 0.885
KXK54806.1
GcvT-like aminomethyltransferase; Belongs to the GcvT family.
  
 0.885
thiG
Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
 
 0.725
KXK56006.1
Glycine dehydrogenase; Overlaps another CDS with the same product name.
   
 
 0.725
gcvP
Glycine dehydrogenase; Overlaps another CDS with the same product name.
   
 
 0.725
KXK56008.1
Glycine dehydrogenase.
   
 
 0.725
metF
5,10-Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
   
 
 0.719
metH_2
Methionine synthase I methyltransferase subunit.
   
 
 0.719
metH_1
5-methyltetrahydrofolate--homocysteine methyltransferase.
   
 
 0.718
KXK55228.1
Methionine synthase.
   
 
 0.718
Your Current Organism:
Chlorobi bacterium OLB7
NCBI taxonomy Id: 1619898
Other names: C. bacterium OLB7
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