STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ravAATPase RavA. (439 aa)    
Predicted Functional Partners:
KXK57496.1
Hypothetical protein.
  
     0.740
KXK57497.1
5'-nucleotidase.
  
     0.738
lytR
Transcriptional regulator LytR.
  
    0.731
KXK55497.1
Coagulation factor protein.
  
     0.717
KXK55106.1
Fibronectin type III domain protein.
  
     0.714
KXK52860.1
TonB-dependent receptor.
  
     0.699
KXK55635.1
BNR/Asp-box repeat-containing protein.
  
     0.680
KXK53296.1
Hypothetical protein.
  
     0.678
bchD
Magnesium-chelatase 60 kDa subunit.
  
 
 0.671
bchI_2
Magnesium-chelatase 38 kDa subunit.
  
 
 0.671
Your Current Organism:
Chlorobi bacterium OLB7
NCBI taxonomy Id: 1619898
Other names: C. bacterium OLB7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.