STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJK13824.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (512 aa)    
Predicted Functional Partners:
KJK11505.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.871
KJK12095.1
Uracil phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
    0.869
KJK08422.1
ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.843
KJK12639.1
Nuclease SbcCD subunit D; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.809
KJK12169.1
Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.798
KJK10613.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.796
KJK10410.1
Ubiquinol-cytochrome c reductase cytochrome b subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.793
KJK10199.1
Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.793
KJK11897.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.787
KJK13068.1
acetyl-CoA carboxyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.780
Your Current Organism:
Terrabacter sp. 28
NCBI taxonomy Id: 1619947
Other names: T. sp. 28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.