STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJK13690.1CdaR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (430 aa)    
Predicted Functional Partners:
KJK13570.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.791
KJK13581.1
Barbiturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.776
KJK13569.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.768
KJK13578.1
Hydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.768
KJK13577.1
5-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.744
KJK13573.1
Carbon monoxide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.706
KJK13572.1
Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.648
KJK13574.1
Nitrilase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.574
KJK12919.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.567
KJK12413.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.489
Your Current Organism:
Terrabacter sp. 28
NCBI taxonomy Id: 1619947
Other names: T. sp. 28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.