STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJK12649.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (122 aa)    
Predicted Functional Partners:
KJK13763.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.755
KJK12424.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.723
KJK11254.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.700
KJK12436.1
NAD-dependent protein deacetylase 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.543
KJK12650.1
Cytochrome BD ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.533
KJK12651.1
Cytochrome C oxidase assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.505
KJK10105.1
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.499
KJK08720.1
Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.497
KJK12652.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.470
KJK12653.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.470
Your Current Organism:
Terrabacter sp. 28
NCBI taxonomy Id: 1619947
Other names: T. sp. 28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.