STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJK12284.1Pyridoxal-dependent decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (459 aa)    
Predicted Functional Partners:
KJK10613.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.940
KJK10431.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.890
KJK13570.1
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.851
KJK09599.1
N(G),N(G)-dimethylarginine dimethylaminohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.851
KJK11793.1
4-aminobutyrate aminotransferase; Catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.787
KJK13481.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.784
KJK11502.1
Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.782
KJK11277.1
Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.782
KJK12506.1
3-hydroxybenzoate 6-hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.774
KJK12385.1
Catalyzes the formation of protocatechuate from 4-hydroxybenzoate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.774
Your Current Organism:
Terrabacter sp. 28
NCBI taxonomy Id: 1619947
Other names: T. sp. 28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.