STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJK12371.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (569 aa)    
Predicted Functional Partners:
KJK12372.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.875
KJK12370.1
Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.557
KJK11252.1
Rossmann fold nucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.515
KJK11313.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.470
KJK08432.1
Ribonuclease II; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.450
KJK12464.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.422
KJK10075.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.421
KJK10379.1
Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.400
Your Current Organism:
Terrabacter sp. 28
NCBI taxonomy Id: 1619947
Other names: T. sp. 28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.