STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJK12062.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)    
Predicted Functional Partners:
KJK10579.1
Orotidine 5'-phosphate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.901
KJK13952.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.827
KJK10401.1
Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.746
KJK13880.1
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.716
KJK11980.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.715
KJK11535.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.695
KJK07909.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.661
KJK10544.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.660
KJK10965.1
Arsenate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.653
KJK08438.1
Arsenic transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.649
Your Current Organism:
Terrabacter sp. 28
NCBI taxonomy Id: 1619947
Other names: T. sp. 28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.