STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJK11018.150S ribosomal protein L2; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)    
Predicted Functional Partners:
KJK12887.1
30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.999
KJK12329.1
50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
KJK12208.1
30S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
rplS
This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.999
KJK11238.1
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
KJK10979.1
30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
KJK10980.1
50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
KJK10988.1
50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
KJK10989.1
DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
KJK10990.1
30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
Your Current Organism:
Terrabacter sp. 28
NCBI taxonomy Id: 1619947
Other names: T. sp. 28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.