STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJK10841.1Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa)    
Predicted Functional Partners:
KJK11022.1
30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.941
KJK11011.1
50S ribosomal protein L14; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.934
KJK13883.1
Acetoin utilization protein AcuC; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.887
KJK11009.1
50S ribosomal protein L5; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.881
KJK11017.1
30S ribosomal protein S19; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.880
tpx
Peroxidase; Antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.815
KJK11025.1
Elongation factor Tu; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.806
KJK13490.1
Mur ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.738
KJK11457.1
Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.734
KJK14015.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.731
Your Current Organism:
Terrabacter sp. 28
NCBI taxonomy Id: 1619947
Other names: T. sp. 28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.