STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJK10810.1acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (405 aa)    
Predicted Functional Partners:
KJK10811.1
Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.968
KJK10809.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.966
KJK11006.1
50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.950
KJK10980.1
50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.892
KJK11002.1
50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.891
KJK10812.1
Peptide chain release factor 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.890
KJK11010.1
50S ribosomal protein L24; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.889
KJK11021.1
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.888
KJK08420.1
Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.876
KJK11012.1
30S ribosomal protein S17; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.870
Your Current Organism:
Terrabacter sp. 28
NCBI taxonomy Id: 1619947
Other names: T. sp. 28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.