STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJK10682.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (532 aa)    
Predicted Functional Partners:
KJK11009.1
50S ribosomal protein L5; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.977
rpsN
30S ribosomal protein S14; Located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.974
KJK11028.1
30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.974
KJK11018.1
50S ribosomal protein L2; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.973
KJK11046.1
50S ribosomal protein L1; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.973
KJK10979.1
30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.933
KJK11002.1
50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.931
KJK12889.1
30S ribosomal protein S18; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.930
KJK11004.1
30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.929
KJK12330.1
50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.927
Your Current Organism:
Terrabacter sp. 28
NCBI taxonomy Id: 1619947
Other names: T. sp. 28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.