STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJK10309.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (474 aa)    
Predicted Functional Partners:
KJK10320.1
Stilbene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.789
KJK12841.1
Bacillolysin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.713
KJK12107.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.705
KJK12329.1
50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.686
KJK13308.1
Methionine sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.684
KJK12330.1
50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.684
KJK11198.1
50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.684
KJK10979.1
30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.684
KJK10988.1
50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.684
rpmJ
50S ribosomal protein L36; Smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.684
Your Current Organism:
Terrabacter sp. 28
NCBI taxonomy Id: 1619947
Other names: T. sp. 28
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.