STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJK15132.1Amine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (574 aa)    
Predicted Functional Partners:
speE-2
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
 
     0.936
KJK15136.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.859
KJK15135.1
SPFH domain/Band 7 family protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.855
KJK15134.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.825
KJK25311.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.807
KJK23026.1
Fatty acid desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.743
KJK24310.1
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.719
KJK20744.1
Farnesyl-diphosphate farnesyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.719
KJK17765.1
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.719
KJK25055.1
Invasion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.684
Your Current Organism:
Burkholderiaceae bacterium 16
NCBI taxonomy Id: 1619952
Other names: B. bacterium 16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.