Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEM60682.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (525 aa)    
Predicted Functional Partners:
CEM60663.1
Glycosyl hydrolase family 20, catalytic domain protein.
 
 0.945
CEM60392.1
Glycosyl hydrolase family 20, catalytic domain protein.
  
 0.936
lacZ
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
    
 0.909
melA
Alpha-galactosidase.
     
  0.900
CEM61098.1
Glycosyl hydrolase family 35; Belongs to the glycosyl hydrolase 35 family.
  
 0.845
CEM60417.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
    0.590
CEM63213.1
ATP-grasp domain protein.
   
    0.590
CEM61289.1
PHP domain protein.
 
  
 0.573
CEM60681.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.482
CEM61782.1
Helicase C-terminal domain protein.
   
    0.466
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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