STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
troDZinc transport system membrane protein TroD. (367 aa)    
Predicted Functional Partners:
troB
Zinc transport system ATP-binding protein TroB.
 0.999
troA
Periplasmic zinc-binding protein TroA; Belongs to the bacterial solute-binding protein 9 family.
 
 0.997
troC
Zinc transport system membrane protein TroC.
 
  
0.967
CEM61640.1
Uncharacterized periplasmic metal-binding protein TP_0034; Belongs to the bacterial solute-binding protein 9 family.
  
 0.938
CEM60753.1
Iron dependent repressor DNA binding domain protein.
  
  
 0.872
CEM61639.1
Putative metal transport system ATP-binding protein TP_0035; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.869
hbpB
Hemin-binding protein B.
  
  
 0.630
hbpB-2
Hemin-binding protein B.
  
  
 0.630
fbpC
Fe(3+) ions import ATP-binding protein FbpC; Belongs to the ABC transporter superfamily.
     
 0.559
CEM61638.1
Putative metal transport system membrane protein TP_0036; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
0.489
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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