Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CEM60352.1K+-dependent Na+/Ca+ exchanger family protein. (341 aa)    
Predicted Functional Partners:
CEM60350.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
       0.494
CEM60351.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.488
CEM60349.1
Bacterial extracellular solute-binding protein, family 7.
       0.440
CEM62694.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
   0.434
CEM60348.1
TRAP transporter, DctM subunit.
  
    0.409
CEM60353.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.408
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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