STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM60352.1K+-dependent Na+/Ca+ exchanger family protein. (341 aa)    
Predicted Functional Partners:
CEM60350.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
       0.495
CEM60351.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.488
CEM60349.1
Bacterial extracellular solute-binding protein, family 7.
       0.441
actP
Copper-transporting ATPase 2.
 
  
 0.420
CEM60348.1
TRAP transporter, DctM subunit.
       0.417
CEM60353.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.408
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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