STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM60364.1Nitroreductase family protein. (171 aa)    
Predicted Functional Partners:
CEM60363.1
Initiation factor, subunit 2 family protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
       0.773
CEM62422.1
Putative YcaO-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.688
CEM61220.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.543
CEM63184.1
ABC-2 type transporter.
  
  
 0.543
CEM63185.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.543
CEM60365.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.531
ribBA
Riboflavin biosynthesis protein RibBA (Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
   
 
 0.499
CEM61478.1
Pyridine nucleotide-disulfide oxidoreductase (modular protein).
     
 0.487
CEM60694.1
Nitroreductase family protein.
  
     0.476
CEM61005.1
Pyridine nucleotide-disulfide oxidoreductase (fragment).
  
  
 0.449
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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