STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM60370.1Citrate transporter. (424 aa)    
Predicted Functional Partners:
CEM60371.1
Hypothetical protein; No homology to any previously reported sequences.
       0.773
pgsC
Poly-gamma-glutamate biosynthesis protein PgsC.
  
     0.764
pgsB
Poly-gamma-glutamate synthase PgsB.
  
     0.757
ggt
Gamma-glutamyltranspeptidase.
 
     0.687
CEM60369.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
       0.654
CEM61012.1
TRAP transporter, DctQ-like membrane protein.
 
 
 0.559
CEM60372.1
Succinylglutamate desuccinylase/aspartoacylase family protein.
       0.497
CEM60348.1
TRAP transporter, DctM subunit.
  
 
 0.494
CEM63464.1
TRAP transporter, DctQ-like membrane protein.
  
 
 0.494
CEM62006.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.456
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.