STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM60381.1Glycerophosphodiester phosphodiesterase family protein (modular protein). (242 aa)    
Predicted Functional Partners:
glpQ
Periplasmic glycerophosphodiester phosphodiesterase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
0.926
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.674
glpF
Putative glycerol uptake facilitator protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.601
CEM60384.1
DHH family protein.
       0.553
CEM60765.1
Endonuclease/exonuclease/phosphatase family protein.
    
 0.550
queH
Conserved hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).
       0.543
CEM60615.1
PAP2 family protein.
 
 
 0.506
CEM60414.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.471
miaA
tRNA dimethylallyltransferase 1; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.
      0.468
PstA
Membrane hypothetical protein; No homology to any previously reported sequences.
  
  
 0.451
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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