Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CEM60395.1Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. (217 aa)    
Predicted Functional Partners:
CEM61429.1
Transporter, Ni2+-Co2+ transporter (NiCoT) family protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
 
   
 0.808
cvpA
CvpA family protein.
  
     0.675
CEM61592.1
OmpA family protein.
  
     0.556
CEM61762.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.515
CEM60926.1
Stage II sporulation protein E.
  
     0.491
CEM62504.1
Tetratricopeptide repeat protein.
  
     0.487
CEM60396.1
TPR repeat-containing protein TP_0920.
 
     0.464
CEM61172.1
Tetratricopeptide repeat protein.
  
     0.440
tmpB
Treponemal membrane protein B.
  
     0.430
CEM62552.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.406
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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