Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CEM60396.1TPR repeat-containing protein TP_0920. (761 aa)    
Predicted Functional Partners:
CEM60452.1
Peptidyl-prolyl cis-trans isomerase.
  
 0.788
CEM60657.1
LysM domain protein.
 
 0.774
CEM61309.1
TPR repeat-containing protein TP_0095.
  
     0.766
CEM60435.1
ATPase, AAA family.
 
 
 0.737
CEM62339.1
Tetratricopeptide repeat protein.
 
 
 
 0.733
CEM61867.1
Tetratricopeptide repeat protein.
 
 
 0.706
CEM61240.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.704
CEM61762.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.692
CEM63176.1
Transporter, major facilitator family protein.
 
     0.674
CEM62631.1
Tetratricopeptide repeat protein.
 
     0.660
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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