STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM60396.1TPR repeat-containing protein TP_0920. (761 aa)    
Predicted Functional Partners:
CEM60657.1
LysM domain protein.
 
 0.783
CEM61309.1
TPR repeat-containing protein TP_0095.
  
     0.766
CEM61240.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.715
CEM61867.1
Tetratricopeptide repeat protein.
 
 
 0.713
CEM63176.1
Transporter, major facilitator family protein.
 
 
   0.688
CEM61762.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.683
CEM60435.1
ATPase, AAA family.
 
 
 0.679
CEM62339.1
Tetratricopeptide repeat protein.
 
   
 0.667
CEM62631.1
Tetratricopeptide repeat protein.
 
     0.660
CEM62504.1
Tetratricopeptide repeat protein.
 
     0.629
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.