Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CEM60408.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (413 aa)    
Predicted Functional Partners:
CEM60411.1
Glycosyltransferase.
     0.973
wbpA
UDP-N-acetyl-D-glucosamine 6-dehydrogenase.
 
  
 0.942
CEM60769.1
Isoamylase N-terminal domain protein.
   
 0.900
CEM62722.1
Glycosyltransferase, group 1 family protein.
 
     0.855
CEM60410.1
UDP-N-acetylglucosamine 2-epimerase homolog.
 
  
 0.851
CEM60427.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.718
rfbC
dTDP-4-deoxyrhamnose-3,5-epimerase (fragment); Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.685
CEM60415.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.683
rmlB
dTDP-glucose 4,6 dehydratase, NAD(P)-binding; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.656
glgP
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.631
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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