Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CEM60415.1Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. (481 aa)    
Predicted Functional Partners:
rfbC
dTDP-4-deoxyrhamnose-3,5-epimerase (fragment); Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.930
rmlA
Glucose-1-phosphate thymidylyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.928
rmlB
dTDP-glucose 4,6 dehydratase, NAD(P)-binding; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.927
CEM61856.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.873
CEM60414.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.836
CEM60412.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.826
rffA
TDP-4-oxo-6-deoxy-D-glucose transaminase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.764
CEM60416.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.748
CEM61109.1
Polysaccharide biosynthesis protein.
  
  
 0.732
CEM60410.1
UDP-N-acetylglucosamine 2-epimerase homolog.
  
  
 0.727
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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