Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CEM60428.12-aminoethylphosphonate--pyruvate transaminase. (614 aa)    
Predicted Functional Partners:
aepY
Phosphonopyruvate decarboxylase.
 
 
 0.998
aepX
Phosphoenolpyruvate mutase.
 
  
 0.990
CEM63305.1
Dehydrogenase, FMN-dependent.
  
 0.857
alaS
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
  
 0.742
CEM61966.1
Rubredoxin.
  
 
 0.725
purD
Phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the GARS family.
  
  
 0.725
crt
3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.660
CEM61264.1
Hydrolase, NUDIX family.
    
  0.654
CEM61137.1
Formiminotransferase-cyclodeaminase.
  
  
 0.642
bcd
Acyl-CoA dehydrogenase, short-chain specific.
   
 
 0.641
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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