STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM60449.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (322 aa)    
Predicted Functional Partners:
CEM60451.1
Tetratricopeptide repeat protein.
 
   
 0.949
CEM60450.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.849
CEM60715.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.756
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily.
       0.655
CEM60718.1
Von Willebrand factor type A domain protein.
 
  
 0.524
CEM60717.1
Von Willebrand factor type A domain protein.
 
  
 0.512
nifJ
Pyruvate-flavodoxin oxidoreductase.
     
 0.410
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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