STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galKGalactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. (404 aa)    
Predicted Functional Partners:
mro
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 0.993
galK-2
Putative galactokinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the GHMP kinase family.
  
  
 
0.926
galE
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 
 0.921
lacZ
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.664
CEM61804.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.629
CEM60462.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.521
rmlB
dTDP-glucose 4,6 dehydratase, NAD(P)-binding; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
   
  
 0.470
CEM60444.1
Transporter, major facilitator family protein.
 
  
 0.436
CEM62560.1
PTS system, beta-glucoside-specific, IIABC component.
   
  
 0.428
CEM60427.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.417
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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