STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsASugar ABC transporter, ATP binding protein. (349 aa)    
Predicted Functional Partners:
CEM63196.1
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.982
rbsC-2
D-ribose transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 0.964
CEM60598.1
ABC transporter, ATP-binding protein (fragment).
     0.946
rbsB
D-ribose transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 0.940
rbsC
Function of homologous gene experimentally demonstrated in an other organism; transporter;fragment of D-ribose transporter subunit; membrane component of ABC superfamily (part 1).
 
     0.934
rbsD
Putative cytoplasmic sugar-binding protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.929
CEM63195.1
Putative ribose/galactose/methyl galactoside import ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 
0.909
CEM63197.1
Sugar-binding domain protein.
 
 0.908
CEM62903.1
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
    
 0.903
CEM61801.1
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.867
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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