STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM60613.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (398 aa)    
Predicted Functional Partners:
CEM60612.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.773
CEM60743.1
ComEC/Rec2-like protein.
   
  
 0.766
CEM60904.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.675
CEM60614.1
Hypothetical protein; No homology to any previously reported sequences.
       0.645
recN
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.604
CEM61784.1
Diguanylate cyclase (GGDEF) domain protein (fragment).
  
    0.547
CEM61922.1
Ser/Thr phosphatase family protein.
  
     0.481
mnmE
tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
       0.459
CEM60615.1
PAP2 family protein.
       0.440
CEM62015.1
Flavoredoxin.
 
     0.402
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.