Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ulaEL-xylulose 5-phosphate 3-epimerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (283 aa)    
Predicted Functional Partners:
araD
L-ribulose-5-phosphate 4-epimerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 0.991
araB
Ribulokinase.
    
 0.906
CEM60638.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.791
ulaG
Putative L-ascorbate 6-phosphate lactonase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.788
CEM60639.1
Putative sugar-specific permease, SgaT/UlaA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.779
CEM60640.1
PTS system, Lactose/Cellobiose specific IIB subunit.
 
     0.778
CEM63167.1
Myo-inositol catabolism protein IolB.
  
  
 0.692
CEM63355.1
Putative L-ribulose-5-phosphate 4-epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.596
CEM60645.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.523
CEM63306.1
Putative shikimate dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.508
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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