Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CEM60646.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (520 aa)    
Predicted Functional Partners:
mtlA
PTS system mannitol-specific EIICBA component (Includes: Mannitol permease IIC component; Mannitol-specific phosphotransferase enzyme IIB component; Mannitol-specific phosphotransferase enzyme IIA component).
 
  
 0.942
ulaC
L-ascorbate-specific enzyme IIA component of PTS; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
     0.891
CEM62560.1
PTS system, beta-glucoside-specific, IIABC component.
 
  
 0.791
fruK
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.642
CEM61447.1
PTS system, Lactose/Cellobiose specific IIB subunit.
 
  
 0.550
CEM61963.1
Putative Protein-N(pi)-phosphohistidine--sugar phosphotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.545
fruA
PTS system fructose-specific EIIABC component.
  
  
 0.530
fruA-2
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PTS system fructose-specific EIIABC component (Includes: Fructose-specific phosphotransferase enzyme IIA component; Fructose-specific phosphotransferase enzyme IIB component; Fructose permease IIC component).
  
  
 0.530
CEM61446.1
Putative sugar-specific permease, SgaT/UlaA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.525
CEM62341.1
Putative ribosomal subunit interface protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.467
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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