STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM60648.1ABC transporter, solute-binding protein. (439 aa)    
Predicted Functional Partners:
CEM60649.1
ABC transporter, permease protein.
 0.993
CEM60650.1
ABC transporter, permease protein.
 
 
 0.920
CEM62313.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.683
CEM61106.1
ABC transporter, permease protein.
 
 0.657
CEM63233.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
 
 0.653
CEM63055.1
ABC transporter, permease protein.
 
 
 0.634
CEM62957.1
Protein LplC (fragment).
 
 
 0.609
CEM63054.1
ABC transporter, permease protein.
 
 
 0.603
lplC
Protein LplC.
 
 
 0.601
CEM61107.1
ABC transporter, permease protein.
 
 
 0.599
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.