Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
CEM60658.1Transglycosylase SLT domain protein. (704 aa)    
Predicted Functional Partners:
CEM60657.1
LysM domain protein.
     
 0.833
CEM62589.1
Penicillin-binding protein, 1A family.
 
   
 0.588
CEM60656.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.561
CEM61784.1
Diguanylate cyclase (GGDEF) domain protein (fragment).
 
  
 0.515
mltG
YceG family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
  
  
 0.512
mrdA
Penicillin-binding protein 2.
 
  
 0.461
murJ
Protein MurJ homolog; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
 
  
 0.459
rlpA
Sporulation and cell division repeat protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
     
 0.443
CEM60780.1
Transglycosylase SLT domain protein.
  
     0.434
CEM62993.1
Peptidase, M23 family.
 
   
 0.430
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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