STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM60672.1Diguanylate cyclase (GGDEF) domain protein. (452 aa)    
Predicted Functional Partners:
CEM61310.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein).
  
  
 0.843
CEM60673.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.804
CEM60674.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.804
CEM60676.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.793
CEM61784.1
Diguanylate cyclase (GGDEF) domain protein (fragment).
  
 
 0.790
CEM60675.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.773
CEM61785.1
Diguanylate cyclase (GGDEF) domain protein (fragment).
  
  
 0.726
CEM61007.1
Response regulator receiver domain protein.
  
 
 0.648
CEM60678.1
Septum formation initiator.
       0.540
CEM62625.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
 
 0.534
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.