STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM60797.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (99 aa)    
Predicted Functional Partners:
CEM62996.1
CBS domain protein.
     
  0.900
CEM60794.1
Hypothetical protein; No homology to any previously reported sequences.
       0.762
CEM60795.1
V-type ATPase 116kDa subunit family protein; Belongs to the V-ATPase 116 kDa subunit family.
       0.762
CEM60796.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.762
fruA
PTS system fructose-specific EIIABC component.
       0.625
secG
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
       0.613
CEM60793.1
ATP synthase subunit C.
       0.552
atpA-2
V-type ATP synthase alpha chain 2; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
       0.548
CEM60791.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.548
CEM60792.1
ATP synthase, subunit F.
       0.548
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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