STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM60911.1Diguanylate cyclase (GGDEF) domain protein. (366 aa)    
Predicted Functional Partners:
CEM61785.1
Diguanylate cyclase (GGDEF) domain protein (fragment).
  
 0.993
CEM61582.1
HD domain protein.
  
 0.983
CEM61310.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein).
  
 0.960
CEM62754.1
HD domain protein.
 
 0.948
CEM63322.1
HD domain protein.
 
 0.947
CEM61784.1
Diguanylate cyclase (GGDEF) domain protein (fragment).
 
 
0.850
CEM61655.1
HD domain protein.
 
 
 0.794
flaB-2
Flagellar filament 31 kDa core protein; Component of the core of the flagella. Belongs to the bacterial flagellin family.
   
 
 0.748
CEM60910.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.693
CEM60912.1
Peptidase, S54 family.
  
    0.692
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.