Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEM60983.1 | CEM61008.1 | TPHV1_130021 | TPHV1_130046 | Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. | FliG domain protein. | 0.894 |
CEM60983.1 | cheR-2 | TPHV1_130021 | TPHV1_180036 | Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. | CheR methyltransferase, SAM binding domain protein. | 0.908 |
CEM60983.1 | flgC | TPHV1_130021 | TPHV1_110048 | Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | 0.888 |
CEM60983.1 | flhB | TPHV1_130021 | TPHV1_80080 | Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. | Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. | 0.944 |
CEM60983.1 | fliH | TPHV1_130021 | TPHV1_110052 | Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. | Flagellar assembly protein FliH. | 0.894 |
CEM60983.1 | fliI | TPHV1_130021 | TPHV1_110053 | Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. | Flagellum-specific ATP synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.933 |
CEM60983.1 | fliN | TPHV1_130021 | TPHV1_80085 | Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. | Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. | 0.955 |
CEM60983.1 | fliP | TPHV1_130021 | TPHV1_80083 | Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. | Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. | 0.923 |
CEM60983.1 | fliS | TPHV1_130021 | TPHV1_210025 | Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. | Flagellar protein FliS. | 0.947 |
CEM60983.1 | motA | TPHV1_130021 | TPHV1_80089 | Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. | Motility protein A. | 0.924 |
CEM61008.1 | CEM60983.1 | TPHV1_130046 | TPHV1_130021 | FliG domain protein. | Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. | 0.894 |
CEM61008.1 | cheR-2 | TPHV1_130046 | TPHV1_180036 | FliG domain protein. | CheR methyltransferase, SAM binding domain protein. | 0.933 |
CEM61008.1 | flgC | TPHV1_130046 | TPHV1_110048 | FliG domain protein. | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | 0.963 |
CEM61008.1 | flhB | TPHV1_130046 | TPHV1_80080 | FliG domain protein. | Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. | 0.955 |
CEM61008.1 | fliH | TPHV1_130046 | TPHV1_110052 | FliG domain protein. | Flagellar assembly protein FliH. | 0.950 |
CEM61008.1 | fliI | TPHV1_130046 | TPHV1_110053 | FliG domain protein. | Flagellum-specific ATP synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.966 |
CEM61008.1 | fliN | TPHV1_130046 | TPHV1_80085 | FliG domain protein. | Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. | 0.999 |
CEM61008.1 | fliP | TPHV1_130046 | TPHV1_80083 | FliG domain protein. | Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. | 0.962 |
CEM61008.1 | fliS | TPHV1_130046 | TPHV1_210025 | FliG domain protein. | Flagellar protein FliS. | 0.918 |
CEM61008.1 | motA | TPHV1_130046 | TPHV1_80089 | FliG domain protein. | Motility protein A. | 0.963 |
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