Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEM61065.1 | CEM61066.1 | TPHV1_140013 | TPHV1_140014 | Hypothetical protein; No homology to any previously reported sequences. | Hypothetical protein; No homology to any previously reported sequences. | 0.701 |
CEM61065.1 | CEM61067.1 | TPHV1_140013 | TPHV1_140015 | Hypothetical protein; No homology to any previously reported sequences. | Methyl-accepting chemotaxis protein signaling domain protein. | 0.701 |
CEM61066.1 | CEM61065.1 | TPHV1_140014 | TPHV1_140013 | Hypothetical protein; No homology to any previously reported sequences. | Hypothetical protein; No homology to any previously reported sequences. | 0.701 |
CEM61066.1 | CEM61067.1 | TPHV1_140014 | TPHV1_140015 | Hypothetical protein; No homology to any previously reported sequences. | Methyl-accepting chemotaxis protein signaling domain protein. | 0.773 |
CEM61067.1 | CEM61065.1 | TPHV1_140015 | TPHV1_140013 | Methyl-accepting chemotaxis protein signaling domain protein. | Hypothetical protein; No homology to any previously reported sequences. | 0.701 |
CEM61067.1 | CEM61066.1 | TPHV1_140015 | TPHV1_140014 | Methyl-accepting chemotaxis protein signaling domain protein. | Hypothetical protein; No homology to any previously reported sequences. | 0.773 |
CEM61067.1 | CEM61310.1 | TPHV1_140015 | TPHV1_170041 | Methyl-accepting chemotaxis protein signaling domain protein. | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein). | 0.504 |
CEM61067.1 | CEM61784.1 | TPHV1_140015 | TPHV1_210017 | Methyl-accepting chemotaxis protein signaling domain protein. | Diguanylate cyclase (GGDEF) domain protein (fragment). | 0.629 |
CEM61067.1 | CEM62272.1 | TPHV1_140015 | TPHV1_30167 | Methyl-accepting chemotaxis protein signaling domain protein. | HAMP domain protein (fragment). | 0.775 |
CEM61067.1 | cheA | TPHV1_140015 | TPHV1_180035 | Methyl-accepting chemotaxis protein signaling domain protein. | Chemotaxis protein CheA. | 0.897 |
CEM61067.1 | cheB | TPHV1_140015 | TPHV1_170055 | Methyl-accepting chemotaxis protein signaling domain protein. | Fused chemotaxis regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.839 |
CEM61067.1 | cheR | TPHV1_140015 | TPHV1_170054 | Methyl-accepting chemotaxis protein signaling domain protein. | CheR methyltransferase, SAM binding domain protein. | 0.839 |
CEM61067.1 | cheR-2 | TPHV1_140015 | TPHV1_180036 | Methyl-accepting chemotaxis protein signaling domain protein. | CheR methyltransferase, SAM binding domain protein. | 0.956 |
CEM61067.1 | cheW | TPHV1_140015 | TPHV1_10276 | Methyl-accepting chemotaxis protein signaling domain protein. | Chemotaxis protein CheW. | 0.886 |
CEM61310.1 | CEM61067.1 | TPHV1_170041 | TPHV1_140015 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein). | Methyl-accepting chemotaxis protein signaling domain protein. | 0.504 |
CEM61310.1 | CEM61784.1 | TPHV1_170041 | TPHV1_210017 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein). | Diguanylate cyclase (GGDEF) domain protein (fragment). | 0.998 |
CEM61310.1 | CEM62272.1 | TPHV1_170041 | TPHV1_30167 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein). | HAMP domain protein (fragment). | 0.504 |
CEM61310.1 | cheA | TPHV1_170041 | TPHV1_180035 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein). | Chemotaxis protein CheA. | 0.955 |
CEM61310.1 | cheB | TPHV1_170041 | TPHV1_170055 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein). | Fused chemotaxis regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.967 |
CEM61310.1 | cheR | TPHV1_170041 | TPHV1_170054 | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein). | CheR methyltransferase, SAM binding domain protein. | 0.974 |
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