STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM61179.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (147 aa)    
Predicted Functional Partners:
CEM61178.1
Metallo-beta-lactamase domain protein.
       0.813
CEM61177.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.773
CEM61173.1
Putative zinc ribbon domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.732
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
       0.687
mltG
YceG family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
       0.674
CEM63306.1
Putative shikimate dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.620
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
 
    0.591
CEM61557.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.542
CEM62250.1
Glycosyl hydrolase, family 57.
  
     0.503
CEM63095.1
Pentapeptide repeat family protein.
  
    0.444
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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