Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CEM60874.1 | CEM61007.1 | TPHV1_120003 | TPHV1_130045 | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | Response regulator receiver domain protein. | 0.535 |
CEM60874.1 | CEM61211.1 | TPHV1_120003 | TPHV1_160012 | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | Transcriptional regulatory protein, C-terminal domain protein (fragment). | 0.503 |
CEM60874.1 | CEM61212.1 | TPHV1_120003 | TPHV1_160013 | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein. | 0.407 |
CEM60874.1 | CEM61310.1 | TPHV1_120003 | TPHV1_170041 | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein). | 0.744 |
CEM60874.1 | CEM61784.1 | TPHV1_120003 | TPHV1_210017 | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | Diguanylate cyclase (GGDEF) domain protein (fragment). | 0.533 |
CEM60874.1 | CEM62038.1 | TPHV1_120003 | TPHV1_260027 | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | 7TM diverse intracellular signaling (fragment). | 0.735 |
CEM60874.1 | cheR-2 | TPHV1_120003 | TPHV1_180036 | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | CheR methyltransferase, SAM binding domain protein. | 0.406 |
CEM61007.1 | CEM60874.1 | TPHV1_130045 | TPHV1_120003 | Response regulator receiver domain protein. | Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. | 0.535 |
CEM61007.1 | CEM61211.1 | TPHV1_130045 | TPHV1_160012 | Response regulator receiver domain protein. | Transcriptional regulatory protein, C-terminal domain protein (fragment). | 0.609 |
CEM61007.1 | CEM61212.1 | TPHV1_130045 | TPHV1_160013 | Response regulator receiver domain protein. | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein. | 0.870 |
CEM61007.1 | CEM61310.1 | TPHV1_130045 | TPHV1_170041 | Response regulator receiver domain protein. | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein). | 0.987 |
CEM61007.1 | CEM61784.1 | TPHV1_130045 | TPHV1_210017 | Response regulator receiver domain protein. | Diguanylate cyclase (GGDEF) domain protein (fragment). | 0.996 |
CEM61007.1 | CEM62038.1 | TPHV1_130045 | TPHV1_260027 | Response regulator receiver domain protein. | 7TM diverse intracellular signaling (fragment). | 0.954 |
CEM61007.1 | CEM62710.1 | TPHV1_130045 | TPHV1_400006 | Response regulator receiver domain protein. | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein. | 0.569 |
CEM61007.1 | cheR-2 | TPHV1_130045 | TPHV1_180036 | Response regulator receiver domain protein. | CheR methyltransferase, SAM binding domain protein. | 0.955 |
CEM61007.1 | nifJ | TPHV1_130045 | TPHV1_50039 | Response regulator receiver domain protein. | Pyruvate-flavodoxin oxidoreductase. | 0.565 |
CEM61064.1 | CEM61211.1 | TPHV1_140012 | TPHV1_160012 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Transcriptional regulatory protein, C-terminal domain protein (fragment). | 0.600 |
CEM61064.1 | CEM61310.1 | TPHV1_140012 | TPHV1_170041 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein (modular protein). | 0.660 |
CEM61064.1 | CEM61784.1 | TPHV1_140012 | TPHV1_210017 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Diguanylate cyclase (GGDEF) domain protein (fragment). | 0.696 |
CEM61064.1 | CEM62038.1 | TPHV1_140012 | TPHV1_260027 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 7TM diverse intracellular signaling (fragment). | 0.728 |
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