STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEM61218.1Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. (232 aa)    
Predicted Functional Partners:
CEM61217.1
Histidine kinase.
  
  
 0.546
yfiL
Uncharacterized ABC transporter ATP-binding protein YfiL.
  
  
 0.540
CEM61219.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
       0.493
CEM62422.1
Putative YcaO-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.475
CEM61220.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
       0.472
CEM60694.1
Nitroreductase family protein.
  
  
 0.405
CEM60364.1
Nitroreductase family protein.
  
  
 0.405
CEM62409.1
Nitroreductase family protein.
  
  
 0.405
CEM62806.1
Putative NADPH-flavin oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the flavin oxidoreductase frp family.
  
  
 0.405
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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