Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEM61228.1Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (332 aa)    
Predicted Functional Partners:
CEM61226.1
Efflux ABC transporter, permease protein.
 
 
 0.987
CEM61225.1
Efflux ABC transporter, permease protein.
 
 
 0.938
CEM61227.1
Uncharacterized ABC transporter ATP-binding protein TM_0352.
 
 
 0.902
CEM61229.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
       0.773
CEM61230.1
Hypothetical protein; No homology to any previously reported sequences.
       0.773
CEM62608.1
Efflux ABC transporter, permease protein.
 
 
 0.727
CEM62601.1
Efflux ABC transporter, permease protein.
  
 
 0.685
nifJ
Pyruvate-flavodoxin oxidoreductase.
   
 
 0.667
yvrO
Uncharacterized ABC transporter ATP-binding protein YvrO.
 
 
 0.588
lolD
Lipoprotein-releasing system ATP-binding protein LolD.
  
 
 0.490
Your Current Organism:
Treponema phagedenis
NCBI taxonomy Id: 162
Other names: T. phagedenis
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